diff --git a/arch/arm/cpu/armv8/zynqmp/Kconfig b/arch/arm/cpu/armv8/zynqmp/Kconfig
index e5a4fdd0..9a19dfa 100644
--- a/arch/arm/cpu/armv8/zynqmp/Kconfig
+++ b/arch/arm/cpu/armv8/zynqmp/Kconfig
@@ -20,10 +20,6 @@
 config SYS_CONFIG_NAME
 	default "xilinx_zynqmp_ep" if TARGET_ZYNQMP_EP
 
-config SECURE_IOU
-	bool "Configure ZynqMP secure IOU"
-	default n
-
 config ZYNQMP_USB
 	bool "Configure ZynqMP USB"
 
diff --git a/arch/arm/cpu/armv8/zynqmp/clk.c b/arch/arm/cpu/armv8/zynqmp/clk.c
index 9218586..40bd2ca 100644
--- a/arch/arm/cpu/armv8/zynqmp/clk.c
+++ b/arch/arm/cpu/armv8/zynqmp/clk.c
@@ -26,6 +26,22 @@
 	return 133000000;
 }
 
+unsigned long zynqmp_get_system_timer_freq(void)
+{
+	u32 ver = zynqmp_get_silicon_version();
+
+	switch (ver) {
+	case ZYNQMP_CSU_VERSION_VELOCE:
+		return 10000;
+	case ZYNQMP_CSU_VERSION_EP108:
+		return 4000000;
+	case ZYNQMP_CSU_VERSION_QEMU:
+		return 50000000;
+	}
+
+	return 100000000;
+}
+
 #ifdef CONFIG_CLOCKS
 /**
  * set_cpu_clk_info() - Initialize clock framework
diff --git a/arch/arm/cpu/armv8/zynqmp/cpu.c b/arch/arm/cpu/armv8/zynqmp/cpu.c
index f90cca3..45b49dc 100644
--- a/arch/arm/cpu/armv8/zynqmp/cpu.c
+++ b/arch/arm/cpu/armv8/zynqmp/cpu.c
@@ -15,8 +15,22 @@
 
 DECLARE_GLOBAL_DATA_PTR;
 
+static unsigned int zynqmp_get_silicon_version_secure(void)
+{
+	u32 ver;
+
+	ver = readl(&csu_base->version);
+	ver &= ZYNQMP_SILICON_VER_MASK;
+	ver >>= ZYNQMP_SILICON_VER_SHIFT;
+
+	return ver;
+}
+
 unsigned int zynqmp_get_silicon_version(void)
 {
+	if (current_el() == 3)
+		return zynqmp_get_silicon_version_secure();
+
 	gd->cpu_clk = get_tbclk();
 
 	switch (gd->cpu_clk) {
diff --git a/arch/arm/include/asm/arch-zynqmp/clk.h b/arch/arm/include/asm/arch-zynqmp/clk.h
index d55bc31..b18333d 100644
--- a/arch/arm/include/asm/arch-zynqmp/clk.h
+++ b/arch/arm/include/asm/arch-zynqmp/clk.h
@@ -9,5 +9,6 @@
 #define _ASM_ARCH_CLK_H_
 
 unsigned long get_uart_clk(int dev_id);
+unsigned long zynqmp_get_system_timer_freq(void);
 
 #endif /* _ASM_ARCH_CLK_H_ */
diff --git a/arch/arm/include/asm/arch-zynqmp/hardware.h b/arch/arm/include/asm/arch-zynqmp/hardware.h
index bbf89d9..5f4cfe3 100644
--- a/arch/arm/include/asm/arch-zynqmp/hardware.h
+++ b/arch/arm/include/asm/arch-zynqmp/hardware.h
@@ -41,11 +41,8 @@
 
 #define crlapb_base ((struct crlapb_regs *)ZYNQMP_CRL_APB_BASEADDR)
 
-#if defined(CONFIG_SECURE_IOU)
-#define ZYNQMP_IOU_SCNTR	0xFF260000
-#else
+#define ZYNQMP_IOU_SCNTR_SECURE	0xFF260000
 #define ZYNQMP_IOU_SCNTR	0xFF250000
-#endif
 #define ZYNQMP_IOU_SCNTR_COUNTER_CONTROL_REGISTER_EN	0x1
 #define ZYNQMP_IOU_SCNTR_COUNTER_CONTROL_REGISTER_HDBG	0x2
 
@@ -57,6 +54,14 @@
 
 #define iou_scntr ((struct iou_scntr *)ZYNQMP_IOU_SCNTR)
 
+struct iou_scntr_secure {
+	u32 counter_control_register;
+	u32 reserved0[7];
+	u32 base_frequency_id_register;
+};
+
+#define iou_scntr_secure ((struct iou_scntr_secure *)ZYNQMP_IOU_SCNTR_SECURE)
+
 /* Bootmode setting values */
 #define BOOT_MODES_MASK	0x0000000F
 #define SD_MODE		0x00000003
@@ -106,9 +111,20 @@
 #define apu_base ((struct apu_regs *)ZYNQMP_APU_BASEADDR)
 
 /* Board version value */
+#define ZYNQMP_CSU_BASEADDR		0xFFCA0000
 #define ZYNQMP_CSU_VERSION_SILICON	0x0
 #define ZYNQMP_CSU_VERSION_EP108	0x1
 #define ZYNQMP_CSU_VERSION_VELOCE	0x2
 #define ZYNQMP_CSU_VERSION_QEMU		0x3
 
+#define ZYNQMP_SILICON_VER_MASK		0xF000
+#define ZYNQMP_SILICON_VER_SHIFT	12
+
+struct csu_regs {
+	u32 reserved0[17];
+	u32 version;
+};
+
+#define csu_base ((struct csu_regs *)ZYNQMP_CSU_BASEADDR)
+
 #endif /* _ASM_ARCH_HARDWARE_H */
diff --git a/board/xilinx/zynqmp/zynqmp.c b/board/xilinx/zynqmp/zynqmp.c
index 2cf4712..63c332f 100644
--- a/board/xilinx/zynqmp/zynqmp.c
+++ b/board/xilinx/zynqmp/zynqmp.c
@@ -9,6 +9,7 @@
 #include <netdev.h>
 #include <ahci.h>
 #include <scsi.h>
+#include <asm/arch/clk.h>
 #include <asm/arch/hardware.h>
 #include <asm/arch/sys_proto.h>
 #include <asm/io.h>
@@ -28,10 +29,18 @@
 {
 	u32 val;
 
-	val = readl(&crlapb_base->timestamp_ref_ctrl);
-	val |= ZYNQMP_CRL_APB_TIMESTAMP_REF_CTRL_CLKACT;
-	writel(val, &crlapb_base->timestamp_ref_ctrl);
+	if (current_el() == 3) {
+		val = readl(&crlapb_base->timestamp_ref_ctrl);
+		val |= ZYNQMP_CRL_APB_TIMESTAMP_REF_CTRL_CLKACT;
+		writel(val, &crlapb_base->timestamp_ref_ctrl);
 
+		/* Program freq register in System counter */
+		writel(zynqmp_get_system_timer_freq(),
+		       &iou_scntr_secure->base_frequency_id_register);
+		/* And enable system counter */
+		writel(ZYNQMP_IOU_SCNTR_COUNTER_CONTROL_REGISTER_EN,
+		       &iou_scntr_secure->counter_control_register);
+	}
 	/* Program freq register in System counter and enable system counter */
 	writel(gd->cpu_clk, &iou_scntr->base_frequency_id_register);
 	writel(ZYNQMP_IOU_SCNTR_COUNTER_CONTROL_REGISTER_HDBG |